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gungorbudak - PhD in Computer Engineering
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gungorbudak

PhD in Computer Engineering
Middle East Technical University • Ankara • Turkey

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • NMR-based proteomics analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Java
  • Javascript
  • Perl
  • PHP
  • Python
  • R

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Bioinformatics projects

Fields of interest

RNA-seq analysis
Allows pathway-based analysis and visualization. PyPathway includes four…
Aims to expand the scope of RNA-Seq studies into the single-subject,…
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
NMR-based proteomics analysis
Automates the elimination of noise peaks. Filt Robot employs convolutional…
Assists users to perform spectra analysis. Dumpling comprises the following…
Performs general ensemble-based validation step and a simple and…
Protein interaction analysis
Consists of a Bayesian shrinkage approach and an associated expectation…
Gathers a set of statistical functions dedicated to the evaluation of…
Supplies an implementation of Regularized LS-TreeBoost & LAD-TreeBoost…