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Jie Huang - 3D Genomics
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Jie Huang

3D Genomics
Peking University • Beijing • China

Bioinformatican & Graphing Scientist

Skills and expertise

Fields of interest
  • BS-seq analysis
  • Metagenomic sequencing analysis
  • scRNA-seq analysis
Languages
  • Chinese
  • English
  • Japanese
Programming languages
  • MATLAB
  • Perl
  • Python
  • R
  • Shell (Bash)

Fields of interest

BS-seq analysis
Predicts de novo profile generation based on sequence context. SPBuild…
Provides a conversion tool for GFF3 tool to legal EMBL format suitable for…
Converts EMBL- or GenBank formatted flat files into submission-ready Webin…
Metagenomic sequencing analysis
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Discovers, delineates and structures metagenomic species pangenomes (MSPs) from…
Predicts de novo profile generation based on sequence context. SPBuild…
scRNA-seq analysis
Allows users to process ChIP-seq data sets from raw reads to accurate…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Allows to make unsupervised projection of single cells from an scRNA-seq…