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irahamidreza

University
Sari Agricultural Sciences and Natural Resources University • Sari • Iran

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English

Fields of interest

WGS analysis
Generates a population of 3D genome structures where each domain is represented…
Provides a tool to select the band width according to the read’s error rates.…
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…
De novo sequencing analysis
Permits high-throughput classification of European, African, and Native…
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
RNA-seq analysis
Simplifies the execution of existing short read aligners (SRA) on…
Finds differentially expressed (DE) genes that avoids some of the shortcomings…
Allows users to perform reconstruction of phylogenetic trees and ancestral…