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jan gene - analysist
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jan gene

analysist

Skills and expertise

Fields of interest
  • WES analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • C++

Fields of interest

WES analysis
Provides a mutation caller for mutation accumulation (MA) experiments.…
Assesses Alu/Alu-mediated rearrangement (AAMR) hotspots and their role in human…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
De novo sequencing analysis
Aims to address the cluster containment problem for phylogenetic networks.…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
Aligns population origins from non-cancer single nucleotide polymorphism (SNP)…
RNA-seq analysis
Identifies genotypic loci and covariates with effects on phenotypic variance.…
Reports candidate transposable elements (TEs) to be considered in downstream…
Predicts missing links in any given bipartite network. Netpredictor provides…