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Julien - PhD fellow
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PhD fellow
French Institute of Health and Medical Research • International Center for Infectiology Research • Lyon • France

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
  • English
  • French
Programming languages
  • C
  • Java
  • Python

Fields of interest

WGS analysis
Allows integration and visualization of population genetics, mutation damage…
Allows users to perform reconstruction of phylogenetic trees and ancestral…
Finds and genotypes non-allelic homologous recombination (NAHR) mediated…
De novo sequencing analysis
Identifies structural variation across (1) a collection of assemblies and (2) a…
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Maps reads against multiple reference genomes. PanVC is designed for variant…
RNA-seq analysis
Deduces phylogenetic in the human immunodeficiency virus (HIV) drug resistance…
Discovers low-rank biclusters within a large data-matrix. This method can be…
Provides a collection of clustering similarity measures for all three…