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Joey Arthur - PhD Student
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Joey Arthur

PhD Student
Stanford University • Stanford • United States of America

Statistics PhD student at Stanford University

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • Python
  • R

TOOLS MAINTAINED

ARC-SV

Desktop

ARC-SV / Automated Reconstruction of Complex Structural Variants

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Detects structural variants (SV) from whole genome sequencing (WGS) data via a probabilistic model. ARC-SV can find complex SV and pinpoint arbitrary local rearrangements from WGS data. This software…

Fields of interest

WGS analysis
Assists users with key gene identification in immune diseases. Gene Ranker is…
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Performs approximate Bayesian computation (ABC) model choice and parameter…
De novo sequencing analysis
Assists users with key gene identification in immune diseases. Gene Ranker is…
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…