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jiansongatnih - Bioinformatics analysis
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jiansongatnih

Bioinformatics analysis
United States Department of Health and Human Services • National Institutes of Health • Bethesda • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • scRNA-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • C++
  • Java
  • Perl
  • Python

Fields of interest

RNA-seq analysis
Furnishes a method for controlling false discovery rate (FDR) using the peFDR…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Performs RNA-seq quantification using an iterative genome-mapping procedure.…
scRNA-seq analysis
Conducts RNA-seq read alignment and read counting from raw sequence reads to…
Reconstructs antibody gene sequences in humans and other animal models from…
Address the dropout events prevalent in scRNAseq data. scImpute is an…
Gene expression array analysis
Enables visualization and exploration of next-generation sequencing (NGS) data.…
Analyzes the association of gene expression indices with interval times. GAIT…
Allows users to perform clustering analysis. NNC is a method based on k-means…