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jimin choi

tsp protein
Ministry of Science ICT and Future Planning • Korea Foundation for Max Planck POSTECH • Pohang • Republic of Korea

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English

Fields of interest

De novo sequencing analysis
Provides a tool to select the band width according to the read’s error rates.…
Provides a method to study the human genome. CpGTLBO is based on the CpGcluster…
Enables gene-by-gene (GbG) analyses including building and validating novel…
RNA-seq analysis
Allows users to optimize a scoring function for pairwise-profile alignment…
Aggregates multiples types of data to determine transcription factors (TFs)…
Permits to correct gene randomization for global dataset tendencies and…
Protein interaction analysis
Predicts gene regulatory regions from genome sequences. DeepGMAP supplies a…
Allows protein-protein interaction (PPI) interface prediction. PPIprediction is…
Provides a method based on fractal theory to count motifs in biological…