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John Davey - Core facility bioinformatician
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John Davey

Core facility bioinformatician
University of York • York • United Kingdom

Bioinformatician.

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • aCGH data analysis
Languages
  • English

Fields of interest

WGS analysis
Assists users for the reconstruction and analysis in the protein adaptation.…
Filters out single nucleotide polymorphism (SNP) events caused by recombination…
Performs structural variants (SVs) calling from low coverage long-read…
RNA-seq analysis
Discovers low-rank biclusters within a large data-matrix. This method can be…
Identifies high-risk individuals for cancers based on their germline genomic…
Allows users to perform de novo discovery of k-mer set memories (KSMs). KMAC is…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…