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Joseph Nalluri - Computational Biologist, Clinical Informatician
Open to new opportunities
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Open to new opportunities

Joseph Nalluri

Computational Biologist, Clinical Informatician
Virginia Commonwealth University • Richmond • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C
  • Javascript
  • MATLAB
  • PHP
  • Python
  • R

TOOLS MAINTAINED

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miRsig

Web

miRsig / miRNA signature

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Allows users to determine and visualize disease-specific miRNA-miRNA interactions for diseases recorded in PhenomiR database. miRsig is a consensus-based network inference method that authorizes for…
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miRegulome

Dataset

miRegulome

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An integrated resource on the miRNA regulome. miRegulome attempts to facilitate the exploration and understanding of miRNA regulomics. miRegulome provides details on the entire regulatory modules of…

Fields of interest

RNA-seq analysis
Enables epigenomic imputation. Avocado is a model that compresses epigenomic…
Performs common tasks in metagenomic data analysis from raw read quality…
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Gene expression array analysis
Contains a library to process over- and under-representation of certain gene…
Enables correction of batch effects in case-control microbiome studies.…
Consists of an algorithm that integrates biological information to search…
Protein interaction analysis
Identifies altered subnetworks. Hierarchical HotNet is a method that jointly…
Predicts multivariate modeling with minimally biased variable selection…
Allows to build a high-quality RNA-seq-based Gene Co-expression Network (GCN)…