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jpfeuffer - PhD
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jpfeuffer

PhD
University of Tübingen • Tübingen • Germany

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • MS-based untargeted proteomics
  • NMR-based proteomics analysis
Languages
  • English
  • German
Programming languages
  • C++
  • Java
  • Javascript
  • Python
  • R

Favorites and Collections

Favorites

OpenMS
Desktop

Collections

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TOOLS MAINTAINED

OpenMS

Desktop

OpenMS

(2) 1 discussion(s)
Allows to manage and analyse Liquid chromatography coupled to mass spectrometry (LC-MS) data. OpenMS is a programming library and tool collection integrated into full-featured workflow systems, such…

Fields of interest

RNA-seq analysis
Serves for regularized kernel methods, focusing especially on regularized…
Furnishes a solution for finding changes in gene networks and for aiding in the…
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
MS-based untargeted proteomics
Provides a reproducible pipeline to analyse isobarically labelled mass…
Predicts liquid chromatography (LC) retention behavior of molecules. ‘retention…
Allows protein identification with robust peptide mass fingerprinting (PMF)…
NMR-based proteomics analysis
Automates the elimination of noise peaks. Filt Robot employs convolutional…
Assists users to perform spectra analysis. Dumpling comprises the following…
Performs general ensemble-based validation step and a simple and…