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kaca vlckova - geomicrobiology
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kaca vlckova

geomicrobiology
Charles University • Prague • Czech Republic

Skills and expertise

Fields of interest
  • Genome edition
  • Metagenomic sequencing analysis
  • aCGH data analysis
Languages
  • English

Fields of interest

Genome edition
Serves as a calculation and visualization tool for high-throughput CRISPR…
Identifies, quantifies and visualizes genuine genome editing events form CRIPR…
Predicts model for single guide RNA (sgRNA) on-target knockout efficacy and…
Metagenomic sequencing analysis
Provides a package for metabolic modeling of microbial communities. Micom…
Assesses the relationships between metabolites in an untargeted metabolomics…
Constructs a universal draft model of metabolism by downloading all reactions…
aCGH data analysis
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…
Combines several steps for a high-quality probe and primer design for a variety…