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kristynakupkova - chip seq data analysis
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chip seq data analysis
Brno University of Technology • Brno • Czech Republic

Skills and expertise

Fields of interest
  • ChIP-seq analysis
  • BS-seq analysis
  • Metagenomic sequencing analysis
  • English
Programming languages
  • Python
  • R

Fields of interest

ChIP-seq analysis
Creates gene networks for a target sample in both dense and sparse region.…
Permits researchers to conduct investigation and construct high-quality…
Measures genomic features such as gene expression levels over time. DPGP is a…
BS-seq analysis
Allows user-friendly data exploration, visualization and interpretation of…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…
Allows users to map long readings with high error rates. lordFAST is designed…
Metagenomic sequencing analysis
Estimates species trees given a set of rooted gene trees. DynaDup is based on…
Allows users to perform exact pairwise alignment. RecNW is an application that…
Evolves phenotypic models of cellular processes. phievo is an evolutionary…