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leajessop - functional GWAS follow up
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leajessop

functional GWAS follow up
National Institutes of Health • National Cancer Institute • Rockville • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • ChIP-seq analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

WGS analysis
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
Allows users to identify signals in an ordered sequence of numbers. This…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
ChIP-seq analysis
Combines structural variation (SV) calls from different algorithms to reduce…
Provides an approach for integrating transcript assemblies. Mikado is a…
Predicts gene regulatory regions from genome sequences. DeepGMAP supplies a…
aCGH data analysis
Combines several steps for a high-quality probe and primer design for a variety…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…