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li shine

Sun Yat-sen University Cancer Center • Guangzhou • China

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • De novo sequencing analysis
  • Chinese
Programming languages
  • Python

Fields of interest

WGS analysis
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Investigates mutation count data to assess the signatures of mutational…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
WES analysis
Serves for mosaic aneuploidy detection and quantification by using next…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Identifies high-risk individuals for cancers based on their germline genomic…
De novo sequencing analysis
Allows users to extract a statistically significant subset of a determined set…
Employs gene expression heterogeneity to identify genes relating to biological…
Processes raw reads to count tables for RNA-seq data using Unique Molecular…