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lincoln2013git - Research associate
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lincoln2013git

Research associate
China Academy of Chinese Medical Sciences • Suzhou Institute of Systems Medicine • Suzhou • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • R

Fields of interest

De novo sequencing analysis
Allows users to process ChIP-seq data sets from raw reads to accurate…
Suits for automated pipeline optimization. ToTem enables the integration of a…
Detects structural variants (SVs) and insertion and deletion genome-wide…
RNA-seq analysis
Allows users to process ChIP-seq data sets from raw reads to accurate…
Analyzes structural variants (SVs) and allele-specific copy numbers of genomic…
Serves for studying differential RNA editing. DRETools is able to find…
Metagenomic sequencing analysis
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Discovers, delineates and structures metagenomic species pangenomes (MSPs) from…
Predicts de novo profile generation based on sequence context. SPBuild…