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Lucas Peres - Internship in Bioinformatics
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Lucas Peres

Internship in Bioinformatics
Centro Universitário do Pará • Belém • Brazil

Undergraduate student in Computer Science and aspiring Bioinformatician. Currently doing research in Transcriptomics and developing RNA-Seq pipelines.

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • English
  • Portuguese
Programming languages
  • Java
  • Python
  • R
  • Shell (Bash)

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Fields of interest

De novo sequencing analysis
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Exploits matrix factorization for gene prioritization. This method leans on an…
Studies dated genetic data allowing the determination of evolutionary rates and…
RNA-seq analysis
Implements several different transition kernels for updating a phylogenetic…
Calls peaks in ChIP-seq data with biological replicates. BinQuasi jointly…
Serves for the identification of differential expression genes by providing an…
Gene expression array analysis
Enables to build custom genome browsers. GIVe is a programming library allowing…
Enables the application of gene set tests (GST) in the absence of large parts…
Carries out gene expression correlation analysis. GECO is a web server that…