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علی شادمنش - crispr-imaging
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علی شادمنش

crispr-imaging
Shahrekord University • Shahr-e Kord • Iran

Skills and expertise

Fields of interest
  • Genome edition
  • ChIP-seq analysis
  • BS-seq analysis
Languages
  • English
Programming languages
  • C

Reviews and Discussions

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CRISPR-RT 2018-02-04, 07:54:52
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AF483758.1 Bos taurus clone UMN0304 microsatellite…

Fields of interest

Genome edition
Predicts model for single guide RNA (sgRNA) on-target knockout efficacy and…
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
ChIP-seq analysis
Allows to build a high-quality RNA-seq-based Gene Co-expression Network (GCN)…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Aggregates multiples types of data to determine transcription factors (TFs)…
BS-seq analysis
Allows user-friendly data exploration, visualization and interpretation of…
Performs common tasks in metagenomic data analysis from raw read quality…
Combines structural variation (SV) calls from different algorithms to reduce…