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meng ma - text mining, variant annotation, rna splicing
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meng ma

text mining, variant annotation, rna splicing
Mount Sinai Health System • Icahn School of Medicine at Mount Sinai • New York City • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Java
  • Pascal
  • Perl
  • Python
  • R

Fields of interest

WGS analysis
Estimates species trees given a set of rooted gene trees. DynaDup is based on…
Identifies relevant associations amongst a large number of variables. MICtools…
Performs structural variants (SVs) calling from low coverage long-read…
De novo sequencing analysis
Calculates anchor points for genome alignment. Spaced Anchor is a pipeline that…
Assists users in counting small k-mer frequencies in nucleotide sequences.…
Allows users to map long readings with high error rates. lordFAST is designed…
RNA-seq analysis
Allows to build a high-quality RNA-seq-based Gene Co-expression Network (GCN)…
Allows detection of a subset of transcriptomic or methylomic residues. TriVote…
Extends the Integrative Genomics Viewer (IGV) with feature for curation…