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maria smati - PhD student
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maria smati

PhD student
University of Mentouri • Constantine • Algeria

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Protein interaction analysis
  • Arabic
  • French
Programming languages
  • Other

Fields of interest

RNA-seq analysis
Consists of a multiple sequence alignment (MSA) tool based on T-Coffee (TC) to…
Conducts RNA-seq read alignment and read counting from raw sequence reads to…
Allows clustering of large-scale networks. HipMCL is a distributed-memory…
Metagenomic sequencing analysis
Consists of a codon-correct alignment and genome annotation tool. VIRULIGN…
Provides a method for studying population-scale microbiome. tmap enables the…
Serves as a dynamic alignment-free and reference-free read compression tool.…
Protein interaction analysis
Creates PyMOL hydrogen bonds (H-bonds) interaction views from Hbind tables.…
Enables network discovery from perturbed expression data. This approach…
Classifies the position preferences of cis-regulatory elements (CRE) via a…