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marzamKI - PhD student
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marzamKI

PhD student
Karolinska Institute • Stockholm • Sweden

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • R

Fields of interest

RNA-seq analysis
Contains a library to process over- and under-representation of certain gene…
Facilitates long non-coding RNAs (LncRNAs) identification and analysis.…
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
BS-seq analysis
Filters spurious variants caused by mouse reads in patient-derived xenografts…
Provides a neighbor protein structure retrieval method. ContactLib scans…
Assists users in analyzing next-generation sequencing (NGS) data. snakePipes…
Gene expression array analysis
Allows users to perform clustering analysis. NNC is a method based on k-means…
Enables the application of gene set tests (GST) in the absence of large parts…
Discovers trend-preserved biclusters of any shape in any types of datasets.…