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najmeh alirezaie - PhD Candidate
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najmeh alirezaie

PhD Candidate
McGill University • Montréal • Canada

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • Perl

Fields of interest

WGS analysis
Inspects the pleiotropic architecture of genome-wide association studies (GWAS)…
Consists of a method for calling of copy number alterations (CNAs) from…
Allows users to map long readings with high error rates. lordFAST is designed…
WES analysis
Allows to rank, filter and explore cancer genomics data (genes, cell lines and…
Reconstructs tumor’s timelines. Palimpsest gathers computational methods…
Investigates mutational signatures in cancer samples. MuSiCa includes options…
RNA-seq analysis
Performs RNA-seq quantification using an iterative genome-mapping procedure.…
Predicts functions of no-knowledge proteins, particularly for those in the…
Performs prediction of master regulators. TETRAMER is a Cytoscape App that (i)…