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nick_youngblut - Department of Microbiome Science
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Department of Microbiome Science
Max Planck Institute • Tuebingen • Germany

Skills and expertise

Fields of interest
  • WGS analysis
  • Metagenomic sequencing analysis
  • aCGH and SNP array analysis
  • English
Programming languages
  • Python
  • R

Reviews and Discussions


PhyloPhlAn 2017-11-01, 09:32:49
It is not available via conda. It requires usearch (and vsearch cannot just be substituted). Also, it requires running the within the same directory *and* all of your files MUST be in…
ITEP 2016-12-05, 08:27:08
ITEP has pretty good documentation and support. Setup is pretty straight-forward, but it's not integrated into conda or other package managers. ITEP is great for creating a database that can be…


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