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nie xiaoqun - comparative genomics
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nie xiaoqun

comparative genomics
Chinese Academy of Sciences • Shanghai Institutes for Biological Sciences • Shanghai • China

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • Chinese
  • English
Programming languages
  • Perl

Fields of interest

WGS analysis
Identifies transposable elements (TEs) of a particular order and classifies…
Provides a workflow management system that extends Airflow's functionality.…
Identifies non-tandem repeats and enables analysis of mitochondrial sequences…
RNA-seq analysis
Permits to correct gene randomization for global dataset tendencies and…
Facilitates long non-coding RNAs (LncRNAs) identification and analysis.…
Provides a tool for the inference of viral transmissions. QUENTIN incorporates…
BS-seq analysis
Combines structural variation (SV) calls from different algorithms to reduce…
Assists users in selecting primers for amplification of complete CpG islands.…
Assists users in pre-processing of read data. BLR is a library preparation…