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ningbiliusi - Biology
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ningbiliusi

Biology
VIriniga Tech

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • Chinese
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

De novo sequencing analysis
Identifies transcription factors (TF) binding sites by combining bidirectional…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Allows users to process ChIP-seq data sets from raw reads to accurate…
RNA-seq analysis
Provides a pattern recognition for cell-free DNA (cfDNA). CfdnaPattern is an…
Provides an online platform for normalization, calculation of performance…
Allows detection of collaborative transcription factor pairs. MMARGE consists…
Metagenomic sequencing analysis
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Discovers, delineates and structures metagenomic species pangenomes (MSPs) from…