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nisha Padmanabhan - Post doctoral fellow
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nisha Padmanabhan

Post doctoral fellow
Duke NUS Graduate Medical School • Singapore • Singapore

Skills and expertise

Fields of interest
  • WGS analysis
  • BS-seq analysis
  • DNA methylation array analysis
Languages
  • English

Fields of interest

WGS analysis
Filters out single nucleotide polymorphism (SNP) events caused by recombination…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Determines the binary matrix of haplotypes and the proportions in the samples.…
BS-seq analysis
Processes raw reads to count tables for RNA-seq data using Unique Molecular…
Permits researchers to conduct investigation and construct high-quality…
Combines structural variation (SV) calls from different algorithms to reduce…
DNA methylation array analysis
Determines the toxicity related end-points of nanoparticles (NPs). toxFlow is…
Contains a library to process over- and under-representation of certain gene…
Enables correction of batch effects in case-control microbiome studies.…