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oluwatosin oluwadare - Develop algorithms for Analysis
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oluwatosin oluwadare

Develop algorithms for Analysis
University of Missouri System • University of Missouri • Columbia • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • C++
  • Java
  • MATLAB
  • Python

TOOLS MAINTAINED

3DMax

Desktop

3DMax

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Reconstructs the 3D structure of chromosomes from Hi-C data. 3DMax combines the maximum likelihood inference approach with a gradient ascent method. It constructs optimized structures for…

Fields of interest

Genome edition
Assists users in predicting the off-target activities of CRISPR/Cas9 in…
Assesses deep-sequencing data from clustered regularly interspaced short…
Arranges single-nucleotide and amino acid variants genome-wide and measures…
WGS analysis
Identifies high-risk individuals for cancers based on their germline genomic…
Evaluates a phylogeny using a root-to-tip approach to define sub-lineages…
Identifies, classifies and annotates transposable elements (TEs) of non-model…
Gene expression array analysis
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Enables visualization and exploration of next-generation sequencing (NGS) data.…
Permits the construction of tumor-cell specific gene/protein co-expression…