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patchper - cancer genmoics
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patchper

cancer genmoics
University of Science and Technology of China • Hefei • China

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • RNA-seq analysis
Languages
  • Chinese
Programming languages
  • Python
  • R
  • Scala

Fields of interest

WGS analysis
Corrects genotype calls for improving genetic mapping in F2 and recombinant…
Identifies genotypic loci and covariates with effects on phenotypic variance.…
Provides assistance for predicting multi locus sequence type (MLST) of genomes.…
WES analysis
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
Performs structural variants (SVs) calling from low coverage long-read…
Provides a predictor that combines the deleteriousness index of the artificial…
RNA-seq analysis
Identifies the conditional dependencies between two types of nodes through a…
Creates gene networks for a target sample in both dense and sparse region.…
Optimises the agreement between gene models for orthologous genes in multiple…