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Pedro Ballester - Bioinformatician • Doctorate/PhD
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Pedro Ballester

Bioinformatician • Doctorate/PhD

French Institute of Health and Medical Research • Paris, France

http://crcm.marseille.inserm.fr/en/researchteams/pedro-ballester/

Skills and expertise

Omics and technologies

  • Drug design
  • RNA-seq analysis
  • Protein interaction analysis

Programming languages

  • C
  • Python
  • R
  • Shell (Bash)

Languages

  • English
  • French
  • Spanish

Tools maintained

RF-Score-VS

Desktop

RF-Score-VS

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Provides general purpose and target independent Virtual Screening (VS) tools. RF-Score-VS is a Random Forest-based scoring function which predicts binding affinity. Its descriptors are based on…

RF-Score

Desktop

RF-Score

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Introduces a substantial improvement over classical scoring functions. RF-Score is a machine-learning scoring function that was constructed in an entirely data-driven manner by circumventing the need…

CCLP

Web

CCLP / Cancer Cell Line Profiler

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Provides a collection of publicly available machine learning models to predict patterns of growth inhibition with estimated confidence using conformal prediction. Prediction models have been…

USR-VS

Web

USR-VS

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A USRbased webserver for large-scale prospective virtual screening. USR-VS performs large-scale ligand-based Virtual Screening (VS), which is oriented to the prospective validation of the obtained…