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pmk601313 - Bioinformatics
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pmk601313

Bioinformatics
National University • Manila • Philippines

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • De novo sequencing analysis
Languages
  • English
Programming languages
  • Java

Fields of interest

Genome edition
Estimates candidate microhomologymediated end joining (MMEJ) loci. MENTHU…
Examines and evaluates sequencing reads from clustered regularly interspaced…
Performs analysis, visualization and comparison of sequencing data from genome…
WGS analysis
Assists in small-variant detection. Pisces is designed to be used on germline…
Allows the joint analysis of individual-level data and summary statistics. LEP…
Allows annotation and prediction of cis-expression quantitative trait locus…
De novo sequencing analysis
Assists in small-variant detection. Pisces is designed to be used on germline…
Represents all sequence reads and their similarity relationships using a graph…
Discovers large indels using optical maps (OM) reads with weak signal. OMIndel…