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Open to new opportunities

praveen kumar vanaparthi

i am intrested in learning
Council of Scientific and Industrial Research • Centre for Cellular and Molecular Biology • Hyderabad • India

Skills and expertise

Fields of interest
  • Genome edition
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • C++
  • Java

Fields of interest

Genome edition
Assesses deep-sequencing data from clustered regularly interspaced short…
Predicts model for single guide RNA (sgRNA) on-target knockout efficacy and…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
De novo sequencing analysis
Allows calculation of the state of any node in a phylogeny under the marginal…
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
RNA-seq analysis
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Consists of a script that constructs a database using the ClinVar XML files.…
Allows users to optimize a scoring function for pairwise-profile alignment…