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Sangram keshari sahu - Computational Biology and Bioinformatics
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Open to new opportunities

Sangram keshari sahu

Computational Biology and Bioinformatics
Indian Institute of Science Education and Research (IISER) • Mohali • India

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • scRNA-seq analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Perl
  • PHP
  • R

Favorites and Collections

Favorites

SAMtools
Desktop
MACS
Desktop
SICER
Desktop
Web
HOMER
Desktop
Bowtie
Desktop
BWA
Desktop
IGV
Desktop
Trimmomatic
Desktop
BEDTools
Desktop
STAR
Desktop
TopHat
Desktop
Cufflinks
Desktop
DESeq
Desktop
edgeR
Desktop
Trinity
Desktop
MISO
Desktop
Tuxedo
Desktop
DAVID
Web
GSEA
Desktop
HISAT
Desktop
StringTie
Desktop
Seurat
Desktop
Ballgown
Desktop
GATK
Desktop

Collections

No collections...

Work experience

Junior Research Fellow
Indian Institute of Science Education and Research Mohali - Mohali
May 2017 - Today

Education

M.Sc. Bioinformatics
Pondicherry University
2015 - 2017

Fields of interest

RNA-seq analysis
Desktop
Cox-nnet
An artificial neural networks (ANN) framework to predict patient prognosis from…
Desktop
APARENT
Predicts isoform expression on entirely held-out libraries. APARENT is a…
Desktop
FABRIC
Identifies genes with alteration bias. FABRIC is an open source application…
Metagenomic sequencing analysis
Desktop
GeneSeqToFamily
Uses existing tools from the Galaxy ToolShed, as well as providing additional…
Desktop
SpaRC
Enables large-scale metagenome and transcriptome reads clustering. SpaRC is an…
Desktop
hts-nim
Provides a library written in Nim programming language that suits for simple…
scRNA-seq analysis
Desktop
scEpath
Allows calculation of energy landscapes and probabilistic directed graphs for…
Desktop
hts-nim
Provides a library written in Nim programming language that suits for simple…
Web
CoVaCS
Enables genotyping and variant annotation of resequencing data produced by…

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