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scarr19 - Microbiology Graduate Student
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scarr19

Microbiology Graduate Student
University of Nebraska System • University of Nebraska–Lincoln • Lincoln • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • Synthetic biology
  • RNA-seq analysis
Languages
  • English
Programming languages
  • Shell (Bash)

Fields of interest

Genome edition
Assesses deep-sequencing data from clustered regularly interspaced short…
Performs analysis, visualization and comparison of sequencing data from genome…
Assists users in predicting the off-target activities of CRISPR/Cas9 in…
Synthetic biology
Deduces the "lab-of-origin" of DNA sequence datasets. predict-lab-origin is an…
Enables synthetic gene designers to evaluate their own constructs and put codon…
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
RNA-seq analysis
Provides a collection of tools designed to work on the BARM database. BARM…
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Allows users to determine gene ontology (GO) annotations for incompletely…