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sd880131 - plant genome assemble
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plant genome assemble
Beijing Genomics Institute • Shenzhen • China

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
  • Chinese
Programming languages
  • Perl

Fields of interest

WGS analysis
Permits visualization and annotation of copy number variations (CNVs) analysis…
Makes base calls in low coverage regions. PBHoover is a consensus and…
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
De novo sequencing analysis
Serves for cancer-related gene prioritization. MGOGP is an algorithm that can…
Allows users to infer evolutionary pathways. HyperTraPS consists of an…
Maps ethyl methanesulfonate (EMS)-induced mutations in forward genetic screens…
RNA-seq analysis
Simplifies the execution of existing short read aligners (SRA) on…
Enables to build custom genome browsers. GIVe is a programming library allowing…
An indexing scheme to support sequence-based querying of terabyte-scale…