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senaj - Bioinformatician • Doctorate/PhD
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senaj

Bioinformatician • Doctorate/PhD

National Center for Genome Resources • Santa Fe, United States of America

Skills and expertise

Omics and technologies

  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis

Programming languages

  • Python

Languages

  • English

Favorites and Collections

Favorites

ShortStack
Desktop
STAR
Desktop
Subread
Desktop
DESeq
Desktop
edgeR
Desktop
SPAdes
Desktop
MEGAN
Desktop
HISAT
Desktop
poretools
Desktop
SeqCluster
Desktop
CLARK
Desktop
DIAMOND
Desktop
SAMSA
Desktop
Centrifuge
Desktop
Pavian
Desktop

Collections

No collections...

Reviews and Discussions

LATEST REVIEWS

poretools 2017-11-07, 05:11:26
Poretools is relatively easy to use those with command-line experience. This software produces easy to understand summary plots of MinION data. The output is more intuitive that the output from…
MEGAN 2017-11-07, 05:03:55
Works well with DIAMOND for metatranscriptomic data analysis.

LATEST DISCUSSIONS

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