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Joe Zhu - statistical genomic
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Joe Zhu

statistical genomic
University of Oxford • Oxford • United Kingdom

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • Chinese
  • English
Programming languages
  • C
  • C++
  • Python
  • R

Fields of interest

WGS analysis
Suits for automated pipeline optimization. ToTem enables the integration of a…
An indexing scheme to support sequence-based querying of terabyte-scale…
Generates a population of 3D genome structures where each domain is represented…
RNA-seq analysis
Maps a read against a reference region if and only if its estimated alignment…
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Integrates existing data on proteins in budding yeast. GEMMER is a web-based…
Metagenomic sequencing analysis
Enables to build custom genome browsers. GIVe is a programming library allowing…
Allows users to process targeted enriched Illumina sequences from raw reads to…
Allows researchers to directly retrieve the annotation of a hit from the…