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shefali setia - Human Genetics
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shefali setia

Human Genetics
Geisinger Health System • Danville • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • aCGH data analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Optimizes the global minimal genetic distance in a given population. MITOMIX…
Provides a method that evaluates saturated DNA mixtures to identify saturated…
Exploits identity by descent (IBD) information to generate genotype imputation…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Protein interaction analysis
Predicts RNA protein interaction via extreme gradient boosting classifier named…
Provides a sparse network component analysis algorithm. SparseNCA is a two…
Assists in analyses of gene regulator. This package offers R modules to (i)…