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Alberto Calderone - Computer Scientist and Developer, Network and Systems Biology, Data Analysis. Maintenance of BCB infrastructure
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Alberto Calderone

Computer Scientist and Developer, Network and Systems Biology, Data Analysis. Maintenance of BCB infrastructure
University of Rome Tor Vergata • Rome • Italy

Skills and expertise

Fields of interest
  • WGS analysis
  • NMR-based proteomics analysis
  • Protein interaction analysis
Languages
  • English
  • German
  • Italian
  • Spanish
Programming languages
  • C
  • C++
  • Java
  • Javascript
  • PHP
  • Python
  • R

Bioinformatics projects

TOOLS MAINTAINED

mentha

Web
Desktop

mentha

(1) 0 discussion(s)
Provides protein-protein interaction (PPI) data for many species, including human. mentha allows users to assemble and analyze collections of proteins and networks of interest. It focuses on…

SPV

Desktop

SPV / Signaling Pathway Visualizer

(0) 0 discussion(s)
Facilitates the visualization of signaling pathways represented as a set of causal interactions in a biologically oriented intuitive top-down representation. SPV can show signaling pathways and…

DISNOR

Dataset

DISNOR

(0) 0 discussion(s)
Supports the assembly of disease-related signaling networks to help infer the pathways disrupted in any specific disease. DISNOR is a resource that links disease-associated genes (extracted from the…

Fields of interest

WGS analysis
Performs guidelines-based variant classification in cardiovascular-related…
Applies high-dimensional penalized regression into heterogeneous subgroups.…
Provides a general foundation for representation, processing, and model-free…
NMR-based proteomics analysis
Automates the elimination of noise peaks. Filt Robot employs convolutional…
Assists users to perform spectra analysis. Dumpling comprises the following…
Performs general ensemble-based validation step and a simple and…
Protein interaction analysis
Serves to predict future disease-gene-chemical associations. Multimodal Network…
Deduces gene regulations by exploiting time-series gene expression data.…
Allows the prediction of protein-ligand interactions. GARF is a scoring…