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Salvador Martínez de Bartolomé - Design and development of tools for data analysis and management of Mass Spectrometry experiment data
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Salvador Martínez de Bartolomé

Design and development of tools for data analysis and management of Mass Spectrometry experiment data
Scripps Research Institute • San Diego • United States of America

Skills and expertise

Fields of interest
  • MS-based untargeted proteomics
  • MS-based untargeted metabolomics
  • Protein interaction analysis
Languages
  • English
  • Spanish
Programming languages
  • Java

TOOLS MAINTAINED

PACom

Desktop

PACom / Protein Assay Comparator

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Permits users to import, integrate, manage and compare numerous proteomics datasets at the same time. PACOM is a Java standalone tool that provides an innovative, easy-to-use and powerful way of data…

Java MIAPE API

Desktop

Java MIAPE API / Java Minimal Information About a Proteomics Experiment API

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Permits extraction and management of MIAPE information from commonly used proteomics data files. Java MIAPE API is an open source Java application programming interface (API) designed in modules that…

Fields of interest

MS-based untargeted proteomics
Discovers unexpected modifications of amino acid residues and possible…
Allows protein identification with robust peptide mass fingerprinting (PMF)…
Plots and overlays interactive 2D maps from deconvoluted liquid chromatography…
MS-based untargeted metabolomics
Provides a web server of in silico metabolization of metabolites. MetWork is an…
Measures parsimonious metabolic networks for generating metabolites. GridProd…
Recognizes and explores all families of species in a microbiota enabling…
Protein interaction analysis
Provides an application for robust integration of heterogeneous data with…
Serves to predict future disease-gene-chemical associations. Multimodal Network…
Deduces gene regulations by exploiting time-series gene expression data.…