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naoyuki sugimoto - Molecular biology
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naoyuki sugimoto

Molecular biology

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • Japanese

Fields of interest

WGS analysis
Trains a decision tree from single nucleotide polymorphism database (dbSNP) and…
Serves for the deconvolution of read-depth information and inferred the…
Provides a mutation caller for mutation accumulation (MA) experiments.…
RNA-seq analysis
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Enables decomposition of a gene tree into trees consistent with a species tree.…
Incorporates tools and workflows for the analysis of environmental DNA (eDNA)…
BS-seq analysis
Provides a standard for bisulfite sequencing data related manipulation.…
Classifies protein sequence and identifies remote protein homology via…
Annotates and filtrates variant files. VarAFT allows the comparison of several…