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taiana pereira - microbiology
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taiana pereira

microbiology
University of Sao Paulo • São Paulo • Brazil

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Protein interaction analysis
Languages
  • Portuguese

Fields of interest

WGS analysis
Permits users to cluster and visualize samples based on DNA mismatch patterns.…
Performs identification of peptides harboring single amino acid variants and…
Allows users to perform reconstruction of phylogenetic trees and ancestral…
De novo sequencing analysis
Assists users in reading TIGER-rate file or other rate files. RatePartitions…
Maps reads against multiple reference genomes. PanVC is designed for variant…
Provides independent C++ implementations of the SUPERB algorithm for counting…
Protein interaction analysis
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
Evaluates binding energy changes upon amino-acid mutations. JayZ is an…
Integrates existing data on proteins in budding yeast. GEMMER is a web-based…