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tjlol - mutation predictions
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tjlol

mutation predictions
Fudan University • Shanghai • China

a little bird of bioinformatics

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • ChIP-seq analysis
Languages
  • Chinese
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…
Offers a method for formalin-fixed paraffin-embedded (FFPE)-introduced…
WES analysis
Permits detection of mosaic structural variants from linked-read exome and…
Permits users to exploit constraints in signature identification. sigLASSO is a…
Serves for Illumina short read sequencing data. PriLive allows users to remove…
ChIP-seq analysis
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Makes base calls in low coverage regions. PBHoover is a consensus and…
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…