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udayraja GK - Research Scholar
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udayraja GK

Research Scholar
Vellore Institute of Technology University • Vellore • India

Skills and expertise

Fields of interest
  • WGS analysis
  • ChIP-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Perl
  • Python

Fields of interest

WGS analysis
Serves to ChIP-seq Wig data. Wig is a standard file format, which in this…
Trains a decision tree from single nucleotide polymorphism database (dbSNP) and…
Supplies a set of features dedicated to quality check (QC) of next generation…
ChIP-seq analysis
Corrects long read hybrid errors. HG-CoLoR combines both (i) the idea to…
Serves for identifying regulons and validating gene regulatory networks.…
Contains a library to process over- and under-representation of certain gene…
Metagenomic sequencing analysis
Maps a read against a reference region if and only if its estimated alignment…
Allows long read alignment to large reference genomes by splitting the index…
Identifies microbial pathogens from metagenomic next-generation sequencing…