Unlock your biological data

?
vijayachitra modhukur's avatar image
vijayachitra modhukur - Bioinformatics researcher
vijayachitra modhukur's avatar image
Upload a photo

vijayachitra modhukur

Bioinformatics researcher
University of Tartu • Tartu • Estonia

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • DNA methylation array analysis
Languages
  • English
Programming languages
  • Python
  • R

Bioinformatics projects

TOOLS MAINTAINED

MethSurv

Web

MethSurv

(0) 0 discussion(s)
Correlates overall survival with DNA methylation levels. MethSurv allows to investigate methylation biomarkers that associate with the survival of various human cancers. It combines unsupervised…

Fields of interest

WGS analysis
Assists users in extracting DNA sequences around genetic variants. SeqTailor is…
Jointly analyzes two traits using de novo exome sequencing data. mTADA scans de…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
RNA-seq analysis
Allows demultiplexing 5’-indexed reads. Axe matches the prefix of a sequence…
Performs alignments to fusion and non-fusion gene constructs simultaneously.…
Identifies possible linkages between protein-coding portions derived from a…
DNA methylation array analysis
Contains a library to process over- and under-representation of certain gene…
Consists of a genomic context explorer. GeneSpy is a program that aims to…
Removes the positional effects and batch effects in data preprocessing.…