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vbonnici - I'm a computer scientist working on computational biology and bioinformatics
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vbonnici

I'm a computer scientist working on computational biology and bioinformatics
University of Verona • Verona • Italy

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
  • Italian
Programming languages
  • C
  • C++
  • Java
  • Javascript
  • Perl
  • PHP
  • Python
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Assists in small-variant detection. Pisces is designed to be used on germline…
Allows the joint analysis of individual-level data and summary statistics. LEP…
Allows annotation and prediction of cis-expression quantitative trait locus…
RNA-seq analysis
Identifies protein-lncRNA interactions. PLIPCOM is constructed from three…
Discovers large indels using optical maps (OM) reads with weak signal. OMIndel…
Identifies genetic variants that overlap with genes coding for lincRNA or miRNA…
Protein interaction analysis
Provides an application for robust integration of heterogeneous data with…
Serves to predict future disease-gene-chemical associations. Multimodal Network…
Deduces gene regulations by exploiting time-series gene expression data.…