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xf78 - NGS research
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xf78

NGS research
Harbin Medical University • Harbin • China

Skills and expertise

Fields of interest
  • WES analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • Chinese
Programming languages
  • Python
  • R

Fields of interest

WES analysis
Integrates predictions of several popular scores (SIFT, Polyphen-2, LRT,…
Detects structural variants (SVs) and insertion and deletion genome-wide…
Performs common tasks in metagenomic data analysis from raw read quality…
De novo sequencing analysis
Allows users to identify branchpoints throughout the human genome thanks to…
Allows users to test multiple gene sets on a tree-transformed gene ontology…
Filters spurious variants caused by mouse reads in patient-derived xenografts…
RNA-seq analysis
Corrects long read hybrid errors. HG-CoLoR combines both (i) the idea to…
Constructs publication-quality visualizations from Cuffdiff, edgeR, and DESeq2.…
Supports the validation of experiments by annotating variants and prioritizing…