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xu haibo - developmental & cancer biology
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xu haibo

developmental & cancer biology
Chinese Academy of Sciences • Kunming Institute of Zoology • Kunming • China

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

De novo sequencing analysis
Identifies conserved non-coding elements (CNEs) between two given DNA sequences…
Enables large-scale metagenome and transcriptome reads clustering. SpaRC is an…
Allows long read alignment to large reference genomes by splitting the index…
RNA-seq analysis
Enables epigenomic imputation. Avocado is a model that compresses epigenomic…
Performs RNA-seq quantification using an iterative genome-mapping procedure.…
Provides a collection of tools designed to work on the BARM database. BARM…
Gene expression array analysis
Provides an online platform for collecting, managing, analyzing, visualizing…
Normalizes measurement of long gene expression (LGE) within RNA-seq and…
Identifies optimal number of clusters while partitioning data. Shrinkage…