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yin tong - Bioinformatician
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yin tong

Bioinformatician
University of Hong Kong • Hong Kong • Hong Kong

Skills and expertise

Fields of interest
  • BS-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • Chinese
Programming languages
  • Assembly language

TOOLS MAINTAINED

MICMIC

Desktop

MICMIC / Methylation Regulation Network Inference by Conditional Mutual Information based PC‚Äźalgorithm

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Assists users to identify DNA methylation in distal regions with a causal effect on tumorigenesis. MICMIC is a pipeline that was developed to find new oncogenes, tumour suppressors and their presumed…

Fields of interest

BS-seq analysis
Performs common tasks in metagenomic data analysis from raw read quality…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Combines structural variation (SV) calls from different algorithms to reduce…
Gene expression array analysis
Enables evaluation, filtering, and analysis of gene models, as well as…
Enables to build custom genome browsers. GIVe is a programming library allowing…
Provides a quick navigation into any set of scores associated to the…
Protein interaction analysis
Realizes link prediction for general directed or undirected complex networks,…
Integrates existing data on proteins in budding yeast. GEMMER is a web-based…
Evaluates binding energy changes upon amino-acid mutations. EasyE is a global…