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youssef.darzi - Metagenomics & Web development
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Open to new opportunities

youssef.darzi

Metagenomics & Web development
Tokyo Institute of Technology • Tokyo • Japan

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
Languages
  • Arabic
  • English
  • French
Programming languages
  • Groovy
  • Java
  • Javascript
  • Python
  • R
  • Shell (Bash)

Bioinformatics projects

Fields of interest

WGS analysis
Analyses genome wide association studies (GWAS) signals and determines…
Enables distributed, likelihood-free inference for computationally demanding…
Simulates phenotypes under different models including genetic variant effects…
De novo sequencing analysis
Provides a general framework for Bayesian inference of reticulate evolution.…
Exploits matrix factorization for gene prioritization. This method leans on an…
Enables gene-by-gene (GbG) analyses including building and validating novel…
Metagenomic sequencing analysis
Identifies association between phenotypes and microbial taxa. BDMMA is a method…
Assists users to find similarity between protein of interest and PDZ-proteins…
Aligns raw reads directly against redundant databases. KMA is an alignment…