Unlock your biological data

?
zahra_jsd's avatar image
zahra_jsd - My interest is in the applications of genomics in better understanding the pathogenesis of disease
zahra_jsd's avatar image
Upload a photo

zahra_jsd

My interest is in the applications of genomics in better understanding the pathogenesis of disease
Vancouver Coastal Health Research Institute • University of British Columbia • Vancouver • Canada

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • MS-based untargeted metabolomics
Languages
  • English
Programming languages
  • Shell (Bash)

Fields of interest

WGS analysis
Maps a read against a reference region if and only if its estimated alignment…
Consists of a statistical mixture of different genotyping error profiles. Geck…
Serves for mosaic aneuploidy detection and quantification by using next…
WES analysis
Reconstructs tumor’s timelines. Palimpsest gathers computational methods…
Allows users to map long readings with high error rates. lordFAST is designed…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
MS-based untargeted metabolomics
Provides a package for metabolic modeling of microbial communities. Micom…
Assesses the relationships between metabolites in an untargeted metabolomics…
Investigates metabolites and their combinations in diseases. The program is…